STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV06_04048Flavoprotein domain-containing protein. (583 aa)    
Predicted Functional Partners:
PV06_01917
FSH1 domain-containing protein.
  
 
 0.860
PV06_07368
Dephospho-CoA kinase.
   
 0.787
PV06_03059
Uncharacterized protein.
    
 0.764
PV06_05862
Uncharacterized protein.
   
 0.762
PV06_05110
Pantoate-beta-alanine ligase.
  
 
 0.740
PV06_01361
Biotin-[acetyl-CoA-carboxylase] ligase.
    
 0.733
PV06_08865
Uncharacterized protein.
  
 
 0.718
PV06_06681
Deoxyuridine 5'-triphosphate nucleotidohydrolase.
  
 
 0.718
PV06_09513
Uncharacterized protein.
  
 
 0.718
PV06_08864
CBFD_NFYB_HMF domain-containing protein.
  
 
 0.718
Your Current Organism:
Exophiala oligosperma
NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.