STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV06_01543Uncharacterized protein. (459 aa)    
Predicted Functional Partners:
PV06_05010
Uncharacterized protein.
    
 0.789
PV06_06555
DRIM domain-containing protein.
   
  0.625
PV06_04001
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.581
PV06_10296
Uncharacterized protein.
    
  0.579
PV06_08439
Utp12 domain-containing protein.
    
  0.579
PV06_03036
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.579
PV06_07199
CBF domain-containing protein.
    
  0.579
PV06_02552
WD_REPEATS_REGION domain-containing protein.
    
  0.579
PV06_00919
Ribosomal RNA small subunit methyltransferase NEP1.
    
  0.579
PV06_06044
PINc domain-containing protein.
    
  0.579
Your Current Organism:
Exophiala oligosperma
NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88
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