STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV06_11391CRAL_TRIO_N domain-containing protein. (274 aa)    
Predicted Functional Partners:
PV06_00706
Uncharacterized protein.
    
 0.643
PV06_04093
AP-1 complex subunit gamma.
    
 0.617
PV06_05831
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
     
 0.595
PV06_06931
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.588
PV06_10776
AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.
    
 0.555
PV06_03634
Uncharacterized protein.
    
 0.523
PV06_06531
Cell division control protein 42, variant.
    
 0.523
PV06_02261
GTP-binding protein rhoA.
    
 0.515
PV06_02283
Uncharacterized protein.
    
 0.515
PV06_10190
DAO domain-containing protein.
    
 0.515
Your Current Organism:
Exophiala oligosperma
NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88
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