STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV06_09212Uncharacterized protein. (292 aa)    
Predicted Functional Partners:
PV06_06460
Uncharacterized protein.
   
   0.988
PV06_03924
Uncharacterized protein.
   
   0.988
PV06_05573
Uncharacterized protein.
   
   0.988
PV06_09661
Ribosomal_L23eN domain-containing protein.
   
 0.984
PV06_02691
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.984
PV06_05080
Ribosomal protein L24.
   
 0.983
PV06_06170
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.982
PV06_03976
KOW domain-containing protein.
   
 0.982
PV06_09084
60S ribosomal protein L32.
   
 0.982
PV06_07933
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
   
 0.981
Your Current Organism:
Exophiala oligosperma
NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88
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