PV06_08127 protein (Exophiala oligosperma) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PV06_08127

CIA30 domain-containing protein. (304 aa)

Predicted Functional Partners:

PV06_07844

0.987

PV06_06613

0.983

PV06_05917

0.974

PV06_11393

0.948

PV06_06366

0.948

PV06_03206

0.944

PV06_01555

0.944

PV06_06526

0.931

PV06_06528

0.867

PV06_03802

0.865

Your Current Organism:

Exophiala oligosperma

NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV06_01555	PV06_03206	A0A0D2ECZ8	A0A0D2DPK9	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Uncharacterized protein.	0.579
PV06_01555	PV06_03802	A0A0D2ECZ8	A0A0D2DR84	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Pyrid_ox_like domain-containing protein.	0.955
PV06_01555	PV06_05917	A0A0D2ECZ8	A0A0D2BXY3	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Cytochrome b5 heme-binding domain-containing protein.	0.632
PV06_01555	PV06_06366	A0A0D2ECZ8	A0A0D2DIM2	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH-ubiquinone oxidoreductase 78 kDa subunit, mitochondrial; Belongs to the complex I 75 kDa subunit family.	0.990
PV06_01555	PV06_06613	A0A0D2ECZ8	A0A0D2DF60	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial; Belongs to the complex I 30 kDa subunit family.	0.999
PV06_01555	PV06_07844	A0A0D2ECZ8	A0A0D2BT91	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Uncharacterized protein.	0.988
PV06_01555	PV06_08127	A0A0D2ECZ8	A0A0D2D8W9	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	CIA30 domain-containing protein.	0.944
PV06_01555	PV06_11393	A0A0D2ECZ8	A0A0D2CZ85	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	4Fe-4S Mo/W bis-MGD-type domain-containing protein.	0.985
PV06_03206	PV06_01555	A0A0D2DPK9	A0A0D2ECZ8	Uncharacterized protein.	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.579
PV06_03206	PV06_03802	A0A0D2DPK9	A0A0D2DR84	Uncharacterized protein.	Pyrid_ox_like domain-containing protein.	0.562
PV06_03206	PV06_06366	A0A0D2DPK9	A0A0D2DIM2	Uncharacterized protein.	NADH-ubiquinone oxidoreductase 78 kDa subunit, mitochondrial; Belongs to the complex I 75 kDa subunit family.	0.487
PV06_03206	PV06_06613	A0A0D2DPK9	A0A0D2DF60	Uncharacterized protein.	NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial; Belongs to the complex I 30 kDa subunit family.	0.900
PV06_03206	PV06_07844	A0A0D2DPK9	A0A0D2BT91	Uncharacterized protein.	Uncharacterized protein.	0.913
PV06_03206	PV06_08127	A0A0D2DPK9	A0A0D2D8W9	Uncharacterized protein.	CIA30 domain-containing protein.	0.944
PV06_03206	PV06_11393	A0A0D2DPK9	A0A0D2CZ85	Uncharacterized protein.	4Fe-4S Mo/W bis-MGD-type domain-containing protein.	0.487
PV06_03802	PV06_01555	A0A0D2DR84	A0A0D2ECZ8	Pyrid_ox_like domain-containing protein.	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.955
PV06_03802	PV06_03206	A0A0D2DR84	A0A0D2DPK9	Pyrid_ox_like domain-containing protein.	Uncharacterized protein.	0.562
PV06_03802	PV06_05917	A0A0D2DR84	A0A0D2BXY3	Pyrid_ox_like domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein.	0.562
PV06_03802	PV06_06366	A0A0D2DR84	A0A0D2DIM2	Pyrid_ox_like domain-containing protein.	NADH-ubiquinone oxidoreductase 78 kDa subunit, mitochondrial; Belongs to the complex I 75 kDa subunit family.	0.986
PV06_03802	PV06_06526	A0A0D2DR84	A0A0D2DZC9	Pyrid_ox_like domain-containing protein.	Tafazzin family protein; Belongs to the taffazin family.	0.495