STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV06_08406OBG-type G domain-containing protein. (416 aa)    
Predicted Functional Partners:
PV06_06787
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
 
 0.797
PV06_04369
RF_PROK_I domain-containing protein.
  
  
 0.707
PV06_02667
Zn(2)-C6 fungal-type domain-containing protein.
  
  
 0.689
PV06_09268
Uncharacterized protein.
  
  
 0.689
PV06_01946
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
     
 0.677
PV06_10164
Uncharacterized protein.
   
   0.673
PV06_03998
Ribosomal_S7 domain-containing protein.
  
 
 0.653
PV06_01044
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.653
PV06_03004
Adenine phosphoribosyltransferase.
  
 
  0.653
PV06_09348
Arginine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.642
Your Current Organism:
Exophiala oligosperma
NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.