STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV06_05408Uncharacterized protein. (345 aa)    
Predicted Functional Partners:
PV06_09624
Uncharacterized protein.
    
  0.662
PV06_01243
P/Homo B domain-containing protein; Belongs to the peptidase S8 family.
     
 0.589
PV06_04992
Uncharacterized protein.
     
 0.535
PV06_01761
Peptidase_M43 domain-containing protein.
     
 0.535
PV06_10888
Fungal_trans domain-containing protein.
     
 0.501
PV06_05130
Zn(2)-C6 fungal-type domain-containing protein.
     
 0.501
PV06_00524
Fungal_trans domain-containing protein.
     
 0.501
PV06_04293
Response regulatory domain-containing protein.
    
 0.454
PV06_00849
Uncharacterized protein.
    
 
 0.446
PV06_02687
WAPL domain-containing protein.
    
 
 0.446
Your Current Organism:
Exophiala oligosperma
NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.