STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV06_05432Amidohydro-rel domain-containing protein. (437 aa)    
Predicted Functional Partners:
PV06_09884
Dihydroorotate dehydrogenase (fumarate); Catalyzes the conversion of dihydroorotate to orotate with fumarate as the electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily.
  
 0.789
PV06_00624
Dihydroorotate dehydrogenase (Fumarate).
  
 0.789
PV06_11077
Tryptophan synthase.
  
 
  0.786
PV06_03519
Tryptophan synthase.
  
 
  0.786
PV06_00322
Carbamoyl-phosphate synthase, large subunit.
  
 0.757
PV06_05746
Carbamoyl-phosphate synthase arginine-specific small chain, variant 1.
  
 0.757
PV06_05059
Protein pyrABCN.
  
 0.757
PV06_00911
Uncharacterized protein.
  
 
 0.715
PV06_09041
Uncharacterized protein.
  
 
 0.662
PV06_07223
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
  
 
 0.662
Your Current Organism:
Exophiala oligosperma
NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.