STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV06_06004N-acetyltransferase domain-containing protein. (234 aa)    
Predicted Functional Partners:
PV06_09758
Uncharacterized protein.
    
 
 0.988
PV06_09255
N-acetyltransferase domain-containing protein.
   
 
 0.988
PV06_05736
Uncharacterized protein.
   
 
 0.865
PV06_05693
Uncharacterized protein.
   
 
 0.863
PV06_09661
Ribosomal_L23eN domain-containing protein.
   
   0.814
PV06_05931
Uncharacterized protein.
    
   0.811
PV06_08520
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
   0.808
PV06_03116
60S ribosomal protein L30.
   
   0.764
PV06_05080
Ribosomal protein L24.
   
   0.732
PV06_02127
60S ribosomal protein L35.
    
 
 0.720
Your Current Organism:
Exophiala oligosperma
NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.