STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV06_10828TauD domain-containing protein. (368 aa)    
Predicted Functional Partners:
PV06_06981
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.529
PV06_00801
TPR_REGION domain-containing protein.
    
  0.527
PV06_01573
2Fe-2S ferredoxin-type domain-containing protein.
   
  0.518
PV06_06898
Uncharacterized protein.
   
  0.518
PV06_05174
PKS_AT domain-containing protein.
  
  0.516
PV06_09188
Pex2_Pex12 domain-containing protein.
    
  0.499
PV06_02425
Pex14_N domain-containing protein.
    
  0.486
PV06_03893
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.452
PV06_04464
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
  0.447
PV06_11370
Uncharacterized protein.
   
  0.446
Your Current Organism:
Exophiala oligosperma
NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88
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