Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PV06_00587 | PV06_02614 | A0A0D2EJ45 | A0A0D2DV80 | RECA_2 domain-containing protein. | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | 0.531 |
PV06_00587 | PV06_02655 | A0A0D2EJ45 | A0A0D2DVA6 | RECA_2 domain-containing protein. | ERCC4 domain-containing protein. | 0.870 |
PV06_00587 | PV06_02911 | A0A0D2EJ45 | A0A0D2DPM4 | RECA_2 domain-containing protein. | Uncharacterized protein. | 0.946 |
PV06_00587 | PV06_03743 | A0A0D2EJ45 | A0A0D2DS97 | RECA_2 domain-containing protein. | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | 0.960 |
PV06_00587 | PV06_06992 | A0A0D2EJ45 | A0A0D2AN96 | RECA_2 domain-containing protein. | Uncharacterized protein. | 0.928 |
PV06_00587 | PV06_07382 | A0A0D2EJ45 | A0A0D2BRS5 | RECA_2 domain-containing protein. | Uncharacterized protein. | 0.765 |
PV06_00587 | PV06_07665 | A0A0D2EJ45 | A0A0D2BSN7 | RECA_2 domain-containing protein. | AAA_23 domain-containing protein. | 0.877 |
PV06_00587 | PV06_08953 | A0A0D2EJ45 | A0A0D2AGB2 | RECA_2 domain-containing protein. | Stn1 domain-containing protein. | 0.765 |
PV06_00587 | PV06_10049 | A0A0D2EJ45 | A0A0D2D6S4 | RECA_2 domain-containing protein. | Ubiquitin-like domain-containing protein. | 0.755 |
PV06_00587 | PV06_11139 | A0A0D2EJ45 | A0A0D2A8H8 | RECA_2 domain-containing protein. | Uncharacterized protein. | 0.928 |
PV06_02614 | PV06_00587 | A0A0D2DV80 | A0A0D2EJ45 | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | RECA_2 domain-containing protein. | 0.531 |
PV06_02614 | PV06_02655 | A0A0D2DV80 | A0A0D2DVA6 | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | ERCC4 domain-containing protein. | 0.930 |
PV06_02614 | PV06_02911 | A0A0D2DV80 | A0A0D2DPM4 | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | Uncharacterized protein. | 0.993 |
PV06_02614 | PV06_03743 | A0A0D2DV80 | A0A0D2DS97 | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | 0.990 |
PV06_02614 | PV06_06992 | A0A0D2DV80 | A0A0D2AN96 | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | Uncharacterized protein. | 0.990 |
PV06_02614 | PV06_07382 | A0A0D2DV80 | A0A0D2BRS5 | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | Uncharacterized protein. | 0.912 |
PV06_02614 | PV06_07665 | A0A0D2DV80 | A0A0D2BSN7 | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | AAA_23 domain-containing protein. | 0.922 |
PV06_02614 | PV06_08953 | A0A0D2DV80 | A0A0D2AGB2 | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | Stn1 domain-containing protein. | 0.765 |
PV06_02614 | PV06_10049 | A0A0D2DV80 | A0A0D2D6S4 | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | Ubiquitin-like domain-containing protein. | 0.814 |
PV06_02614 | PV06_11139 | A0A0D2DV80 | A0A0D2A8H8 | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | Uncharacterized protein. | 0.928 |
page 1 of 6