STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV06_03749L-type lectin-like domain-containing protein. (325 aa)    
Predicted Functional Partners:
PV06_04179
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.798
PV06_02040
GOLD domain-containing protein.
   
 0.784
PV06_04595
Endoplasmic reticulum vesicle protein 25.
   
 0.769
PV06_10595
Uncharacterized protein.
   
 0.727
PV06_09594
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.704
PV06_01569
t-SNARE coiled-coil homology domain-containing protein.
   
 
 0.698
PV06_04309
Protein transporter sec24.
    
 0.695
PV06_06999
GRASP55_65 domain-containing protein.
   
  0.690
PV06_03847
t-SNARE coiled-coil homology domain-containing protein.
     
 0.669
PV06_00388
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.669
Your Current Organism:
Exophiala oligosperma
NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88
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