Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MED20 | PV06_01830 | A0A0D2EB19 | A0A0D2DSV0 | Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.511 |
MED20 | PV06_02984 | A0A0D2EB19 | A0A0D2C463 | Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.406 |
MED20 | PV06_03499 | A0A0D2EB19 | A0A0D2C5M6 | Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.535 |
MED20 | PV06_06179 | A0A0D2EB19 | A0A0D2ARZ0 | Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.538 |
MED20 | PV06_09513 | A0A0D2EB19 | A0A0D2D5X2 | Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.566 |
PV06_00849 | PV06_01830 | A0A0D2CEC0 | A0A0D2DSV0 | Uncharacterized protein. | Uncharacterized protein. | 0.807 |
PV06_00849 | PV06_06179 | A0A0D2CEC0 | A0A0D2ARZ0 | Uncharacterized protein. | Uncharacterized protein. | 0.909 |
PV06_00869 | PV06_01830 | A0A0D2EK33 | A0A0D2DSV0 | Uncharacterized protein. | Uncharacterized protein. | 0.521 |
PV06_00869 | PV06_03499 | A0A0D2EK33 | A0A0D2C5M6 | Uncharacterized protein. | Uncharacterized protein. | 0.409 |
PV06_00869 | PV06_06179 | A0A0D2EK33 | A0A0D2ARZ0 | Uncharacterized protein. | Uncharacterized protein. | 0.467 |
PV06_01830 | MED20 | A0A0D2DSV0 | A0A0D2EB19 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.511 |
PV06_01830 | PV06_00849 | A0A0D2DSV0 | A0A0D2CEC0 | Uncharacterized protein. | Uncharacterized protein. | 0.807 |
PV06_01830 | PV06_00869 | A0A0D2DSV0 | A0A0D2EK33 | Uncharacterized protein. | Uncharacterized protein. | 0.521 |
PV06_01830 | PV06_02687 | A0A0D2DSV0 | A0A0D2DWS6 | Uncharacterized protein. | WAPL domain-containing protein. | 0.807 |
PV06_01830 | PV06_02984 | A0A0D2DSV0 | A0A0D2C463 | Uncharacterized protein. | Uncharacterized protein. | 0.511 |
PV06_01830 | PV06_03499 | A0A0D2DSV0 | A0A0D2C5M6 | Uncharacterized protein. | Uncharacterized protein. | 0.547 |
PV06_01830 | PV06_04494 | A0A0D2DSV0 | A0A0D2DLT3 | Uncharacterized protein. | Uncharacterized protein. | 0.516 |
PV06_01830 | PV06_06179 | A0A0D2DSV0 | A0A0D2ARZ0 | Uncharacterized protein. | Uncharacterized protein. | 0.621 |
PV06_01830 | PV06_09513 | A0A0D2DSV0 | A0A0D2D5X2 | Uncharacterized protein. | Uncharacterized protein. | 0.541 |
PV06_01830 | PV06_10856 | A0A0D2DSV0 | A0A0D2D3T3 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.517 |
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