STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV06_08638Zn(2)-C6 fungal-type domain-containing protein. (746 aa)    
Predicted Functional Partners:
PV06_00303
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
  0.864
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.863
PV06_03682
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.863
PV06_03036
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.861
PV06_07937
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
  0.861
PV06_10470
40S ribosomal protein S20.
   
  0.858
PV06_10450
40S ribosomal protein S19.
   
 0.857
PV06_00492
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
   
 0.854
PV06_07908
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.845
PV06_09475
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.843
Your Current Organism:
Exophiala oligosperma
NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.