PV06_07531 protein (Exophiala oligosperma) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PV06_07531

Glycos_transf_1 domain-containing protein. (705 aa)

Predicted Functional Partners:

PV06_05249

0.861

PV06_02217

0.860

PV06_06773

0.788

PV06_04064

0.782

PV06_02277

0.773

PV06_02640

0.765

PV06_03403

0.743

PV06_04753

0.739

PV06_05996

0.737

PV06_07300

0.733

Your Current Organism:

Exophiala oligosperma

NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV06_02217	PV06_02640	A0A0D2DVF6	A0A0D2CB23	ERCC4 domain-containing protein.	Uncharacterized protein.	0.591
PV06_02217	PV06_07531	A0A0D2DVF6	A0A0D2DXR3	ERCC4 domain-containing protein.	Glycos_transf_1 domain-containing protein.	0.860
PV06_02277	PV06_02640	A0A0D2DVI9	A0A0D2CB23	Phosphoglucomutase; Belongs to the phosphohexose mutase family.	Uncharacterized protein.	0.773
PV06_02277	PV06_04064	A0A0D2DVI9	A0A0D2B0R3	Phosphoglucomutase; Belongs to the phosphohexose mutase family.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.987
PV06_02277	PV06_05249	A0A0D2DVI9	A0A0D2C355	Phosphoglucomutase; Belongs to the phosphohexose mutase family.	1,4-alpha-glucan-branching enzyme.	0.982
PV06_02277	PV06_05996	A0A0D2DVI9	A0A0D2DJ28	Phosphoglucomutase; Belongs to the phosphohexose mutase family.	Glycogen debranching enzyme.	0.961
PV06_02277	PV06_07531	A0A0D2DVI9	A0A0D2DXR3	Phosphoglucomutase; Belongs to the phosphohexose mutase family.	Glycos_transf_1 domain-containing protein.	0.773
PV06_02640	PV06_02217	A0A0D2CB23	A0A0D2DVF6	Uncharacterized protein.	ERCC4 domain-containing protein.	0.591
PV06_02640	PV06_02277	A0A0D2CB23	A0A0D2DVI9	Uncharacterized protein.	Phosphoglucomutase; Belongs to the phosphohexose mutase family.	0.773
PV06_02640	PV06_03403	A0A0D2CB23	A0A0D2C5D4	Uncharacterized protein.	Uncharacterized protein.	0.743
PV06_02640	PV06_04064	A0A0D2CB23	A0A0D2B0R3	Uncharacterized protein.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.782
PV06_02640	PV06_04753	A0A0D2CB23	A0A0D2E773	Uncharacterized protein.	Uncharacterized protein.	0.739
PV06_02640	PV06_05249	A0A0D2CB23	A0A0D2C355	Uncharacterized protein.	1,4-alpha-glucan-branching enzyme.	0.861
PV06_02640	PV06_05996	A0A0D2CB23	A0A0D2DJ28	Uncharacterized protein.	Glycogen debranching enzyme.	0.737
PV06_02640	PV06_06773	A0A0D2CB23	A0A0D2E081	Uncharacterized protein.	CBM21 domain-containing protein.	0.788
PV06_02640	PV06_07300	A0A0D2CB23	A0A0D2BWD0	Uncharacterized protein.	Uncharacterized protein; Belongs to the GrpE family.	0.610
PV06_02640	PV06_07531	A0A0D2CB23	A0A0D2DXR3	Uncharacterized protein.	Glycos_transf_1 domain-containing protein.	0.765
PV06_03403	PV06_02640	A0A0D2C5D4	A0A0D2CB23	Uncharacterized protein.	Uncharacterized protein.	0.743
PV06_03403	PV06_04753	A0A0D2C5D4	A0A0D2E773	Uncharacterized protein.	Uncharacterized protein.	0.880
PV06_03403	PV06_07531	A0A0D2C5D4	A0A0D2DXR3	Uncharacterized protein.	Glycos_transf_1 domain-containing protein.	0.743