STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV06_05837Uncharacterized protein. (360 aa)    
Predicted Functional Partners:
PV06_04560
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
    
 0.999
PV06_06190
Uncharacterized protein.
    
 0.996
PV06_05815
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
     
 0.861
PV06_01653
Uncharacterized protein.
     
 0.859
PV06_07038
Di-trans,poly-cis-decaprenylcistransferase.
     
 0.851
PV06_01590
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
     
 0.851
PV06_06375
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
     
 0.850
PV06_06122
Farnesyl-diphosphate farnesyltransferase.
     
 0.836
PV06_01234
Uncharacterized protein.
     
 0.821
PV06_01068
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
     
 0.803
Your Current Organism:
Exophiala oligosperma
NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.