STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV06_06335Uncharacterized protein. (720 aa)    
Predicted Functional Partners:
PV06_01662
Uncharacterized protein.
    
 0.669
PV06_02655
ERCC4 domain-containing protein.
    
 0.641
PV06_08865
Uncharacterized protein.
   
  0.625
PV06_06681
Deoxyuridine 5'-triphosphate nucleotidohydrolase.
   
  0.625
PV06_09513
Uncharacterized protein.
   
  0.625
PV06_08864
CBFD_NFYB_HMF domain-containing protein.
   
  0.625
PV06_02850
Uncharacterized protein.
    
 0.612
PV06_03743
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
  0.600
PV06_05341
Uncharacterized protein.
    
 0.568
PV06_02217
ERCC4 domain-containing protein.
   
 0.558
Your Current Organism:
Exophiala oligosperma
NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88
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