Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PV06_02192 | PV06_02694 | A0A0D2EF32 | A0A0D2EGM4 | Riboflavin synthase, alpha subunit. | Uncharacterized protein. | 0.933 |
PV06_02192 | PV06_03072 | A0A0D2EF32 | A0A0D2AXS1 | Riboflavin synthase, alpha subunit. | Coronin; Belongs to the WD repeat coronin family. | 0.949 |
PV06_02192 | PV06_03130 | A0A0D2EF32 | A0A0D2AXW2 | Riboflavin synthase, alpha subunit. | PH domain-containing protein. | 0.949 |
PV06_02192 | PV06_03836 | A0A0D2EF32 | A0A0D2EBW2 | Riboflavin synthase, alpha subunit. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. | 0.993 |
PV06_02192 | PV06_06223 | A0A0D2EF32 | A0A0D2BYZ5 | Riboflavin synthase, alpha subunit. | Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions. | 0.792 |
PV06_02192 | PV06_06273 | A0A0D2EF32 | A0A0D2DIB4 | Riboflavin synthase, alpha subunit. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.996 |
PV06_02192 | PV06_06523 | A0A0D2EF32 | A0A0D2ALQ3 | Riboflavin synthase, alpha subunit. | Flavokinase domain-containing protein. | 0.859 |
PV06_02192 | PV06_07820 | A0A0D2EF32 | A0A0D2DDX5 | Riboflavin synthase, alpha subunit. | F-box domain-containing protein. | 0.933 |
PV06_02192 | PV06_08056 | A0A0D2EF32 | A0A0D2AH75 | Riboflavin synthase, alpha subunit. | GTP cyclohydrolase II. | 0.983 |
PV06_02192 | PV06_08996 | A0A0D2EF32 | A0A0D2AGE9 | Riboflavin synthase, alpha subunit. | Flavokinase domain-containing protein. | 0.851 |
PV06_02694 | PV06_02192 | A0A0D2EGM4 | A0A0D2EF32 | Uncharacterized protein. | Riboflavin synthase, alpha subunit. | 0.933 |
PV06_02694 | PV06_03072 | A0A0D2EGM4 | A0A0D2AXS1 | Uncharacterized protein. | Coronin; Belongs to the WD repeat coronin family. | 0.805 |
PV06_02694 | PV06_03130 | A0A0D2EGM4 | A0A0D2AXW2 | Uncharacterized protein. | PH domain-containing protein. | 0.805 |
PV06_02694 | PV06_06273 | A0A0D2EGM4 | A0A0D2DIB4 | Uncharacterized protein. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.940 |
PV06_02694 | PV06_06523 | A0A0D2EGM4 | A0A0D2ALQ3 | Uncharacterized protein. | Flavokinase domain-containing protein. | 0.615 |
PV06_02694 | PV06_08996 | A0A0D2EGM4 | A0A0D2AGE9 | Uncharacterized protein. | Flavokinase domain-containing protein. | 0.615 |
PV06_03072 | PV06_02192 | A0A0D2AXS1 | A0A0D2EF32 | Coronin; Belongs to the WD repeat coronin family. | Riboflavin synthase, alpha subunit. | 0.949 |
PV06_03072 | PV06_02694 | A0A0D2AXS1 | A0A0D2EGM4 | Coronin; Belongs to the WD repeat coronin family. | Uncharacterized protein. | 0.805 |
PV06_03072 | PV06_03836 | A0A0D2AXS1 | A0A0D2EBW2 | Coronin; Belongs to the WD repeat coronin family. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. | 0.805 |
PV06_03072 | PV06_06223 | A0A0D2AXS1 | A0A0D2BYZ5 | Coronin; Belongs to the WD repeat coronin family. | Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions. | 0.805 |
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