STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV06_00507Uncharacterized protein. (640 aa)    
Predicted Functional Partners:
PV06_01332
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.942
PV06_07571
Sec2p domain-containing protein.
    
 0.941
PV06_01850
GTP-binding protein ypt1.
 
 
 0.939
PV06_00274
Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
    
 0.883
PV06_00044
Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.
   
 0.869
PV06_03221
Uncharacterized protein.
    
 0.862
PV06_09457
Uncharacterized protein.
    
  0.859
PV06_00073
Sec8_exocyst domain-containing protein.
    
 0.856
PV06_00708
t-SNARE coiled-coil homology domain-containing protein.
   
 0.841
PV06_03830
Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 0.840
Your Current Organism:
Exophiala oligosperma
NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.