STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV06_01214PEP_hydrolase domain-containing protein. (280 aa)    
Predicted Functional Partners:
PV06_01215
Uncharacterized protein.
 
     0.941
PV06_05915
Protoheme IX farnesyltransferase.
   
 
 0.705
PV06_09222
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.543
PV06_06054
Cytochrome c1, heme protein, mitochondrial.
   
 
 0.501
PV06_04566
Epimerase domain-containing protein.
   
 
 0.441
PV06_05482
Uncharacterized protein.
   
    0.431
PV06_03135
Uncharacterized protein.
   
    0.431
PV06_02976
Helo_like_N domain-containing protein.
   
    0.431
Your Current Organism:
Exophiala oligosperma
NCBI taxonomy Id: 215243
Other names: CBS 265.49, CBS 725.88, E. oligosperma, Exophiala oligosperma Calendron ex de Hoog & Tintelnot, Exophiala sp. CBS 725.88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.