STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316YAT4Uncharacterized protein. (49 aa)    
Predicted Functional Partners:
A0A316YL48
Putative ubiquitin--protein ligase hus5; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.689
A0A316YRE2
ThiF domain-containing protein.
    
 0.488
A0A316YHN9
Uncharacterized protein.
    
  0.472
A0A316YF85
Transcription elongation factor.
    
  0.450
A0A316YU85
TFIIS central domain-containing protein.
    
  0.440
Your Current Organism:
Acaromyces ingoldii
NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050
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