STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316YB35Uncharacterized protein. (609 aa)    
Predicted Functional Partners:
A0A316YWU4
Ribosomal protein L2.
   
   0.748
A0A316YGC3
Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
   
   0.730
A0A316YZV8
Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
 0.723
A0A316YTJ9
Uncharacterized protein.
   
 
 0.706
A0A316YX26
Ribosomal protein L4.
   
 
 0.703
A0A316YLM3
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.700
A0A316YR26
Uncharacterized protein.
   
   0.698
A0A316YW57
Ribonuclease III.
   
 
 0.696
A0A316YN03
Uncharacterized protein.
   
 
 0.695
A0A316YCM2
MRP-S28 domain-containing protein.
   
   0.688
Your Current Organism:
Acaromyces ingoldii
NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050
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