STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316YDN7H15 domain-containing protein. (182 aa)    
Predicted Functional Partners:
A0A316YGV4
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
 0.853
A0A316YSF0
Uncharacterized protein.
    
 0.829
A0A316YY80
Replication protein A, subunit RPA32.
    
 0.829
A0A316YBW1
Putative karyopherin beta-1 subunit.
    
   0.732
A0A316YNN1
Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.
    
 
 0.720
A0A316YQD4
Putative Cdk1-cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.
    
 
 0.720
A0A316YQD3
Histone H2B; Belongs to the histone H2B family.
   
 
 0.688
A0A316YN74
Histone H2A; Belongs to the histone H2A family.
   
 0.645
A0A316YEV9
Protein disulfide-isomerase.
    
  0.630
A0A316YD72
High mobility group box.
    
 0.608
Your Current Organism:
Acaromyces ingoldii
NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050
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