Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A316YEF3 | A0A316YH62 | SET domain-containing protein. | SET domain-containing protein. | 0.456 |
A0A316YEF3 | A0A316YHQ3 | SET domain-containing protein. | Zn(2)-C6 fungal-type domain-containing protein. | 0.467 |
A0A316YEF3 | A0A316YI31 | SET domain-containing protein. | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase. | 0.445 |
A0A316YEF3 | A0A316YK81 | SET domain-containing protein. | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase. | 0.445 |
A0A316YEF3 | A0A316YLE8 | SET domain-containing protein. | MINDY_DUB domain-containing protein. | 0.655 |
A0A316YEF3 | A0A316YQ28 | SET domain-containing protein. | Uncharacterized protein. | 0.554 |
A0A316YEF3 | A0A316YT47 | SET domain-containing protein. | ATP-citrate synthase. | 0.542 |
A0A316YEF3 | A0A316YW32 | SET domain-containing protein. | Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.543 |
A0A316YEF3 | A0A316YZ42 | SET domain-containing protein. | Uncharacterized protein. | 0.467 |
A0A316YEF3 | A0A316YZC9 | SET domain-containing protein. | SET domain-containing protein. | 0.506 |
A0A316YH62 | A0A316YEF3 | SET domain-containing protein. | SET domain-containing protein. | 0.456 |
A0A316YH62 | A0A316YHQ3 | SET domain-containing protein. | Zn(2)-C6 fungal-type domain-containing protein. | 0.467 |
A0A316YH62 | A0A316YI31 | SET domain-containing protein. | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase. | 0.445 |
A0A316YH62 | A0A316YK81 | SET domain-containing protein. | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase. | 0.445 |
A0A316YH62 | A0A316YLE8 | SET domain-containing protein. | MINDY_DUB domain-containing protein. | 0.655 |
A0A316YH62 | A0A316YQ28 | SET domain-containing protein. | Uncharacterized protein. | 0.487 |
A0A316YH62 | A0A316YT47 | SET domain-containing protein. | ATP-citrate synthase. | 0.542 |
A0A316YH62 | A0A316YW32 | SET domain-containing protein. | Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.543 |
A0A316YH62 | A0A316YZ42 | SET domain-containing protein. | Uncharacterized protein. | 0.467 |
A0A316YH62 | A0A316YZC9 | SET domain-containing protein. | SET domain-containing protein. | 0.457 |
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