STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316YHW7RRM domain-containing protein. (866 aa)    
Predicted Functional Partners:
A0A316YLD6
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.589
A0A316YIJ5
Cytochrome b5 heme-binding domain-containing protein.
    
 0.545
A0A316YKF3
Putative DNA-directed RNA polymerase II chain Rpb7.
    
  0.533
A0A316YQ73
RNA polymerase.
    
  0.533
A0A316YV98
Putative 25 kd subunit of DNA-directed RNA polymerases I, II and III.
    
  0.533
A0A316YCP3
RBP11-like subunits of RNA polymerase.
    
  0.499
A0A316YRR2
Uncharacterized protein.
    
  0.496
A0A316YVR3
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.482
A0A316YVW2
Insert subdomain of RNA polymerase alpha subunit.
    
  0.480
A0A316YYD6
UBA domain-containing protein.
    
  0.477
Your Current Organism:
Acaromyces ingoldii
NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050
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