STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316YI66Uncharacterized protein. (442 aa)    
Predicted Functional Partners:
A0A316YWZ0
Nuclear cap-binding protein subunit 2.
    
 0.736
A0A316YG91
Uncharacterized protein.
    
 0.725
A0A316YHI8
RNA-binding domain-containing protein.
   
 0.720
A0A316YXK7
RNA-binding domain-containing protein.
   
 0.707
FA10DRAFT_625
Uncharacterized protein.
   
 0.678
A0A316YM92
RNA-binding domain-containing protein.
   
 0.666
A0A316YU05
RRM domain-containing protein.
   
 0.665
A0A316YYI8
Putative PRP8-U5 snRNP protein, pre-mRNA splicing factor.
    
   0.653
A0A316YPK1
Uncharacterized protein.
   
  0.652
A0A316YVR3
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.643
Your Current Organism:
Acaromyces ingoldii
NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050
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