STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316YIJ7Cryptochrome. (581 aa)    
Predicted Functional Partners:
A0A316YE92
TIMELESS domain-containing protein.
    
 0.774
A0A316YK33
Kinase-like protein; Belongs to the protein kinase superfamily.
    
 0.740
A0A316YI02
Mediator of RNA polymerase II transcription subunit 13; Component of the SRB8-11 complex. The SRB8-11 complex is a regulatory module of the Mediator complex which is itself involved in regulation of basal and activated RNA polymerase II-dependent transcription. The SRB8-11 complex may be involved in the transcriptional repression of a subset of genes regulated by Mediator. It may inhibit the association of the Mediator complex with RNA polymerase II to form the holoenzyme complex.
    
 0.651
A0A316YY12
RNI-like protein.
    
 0.644
A0A316YN11
Uncharacterized protein.
    
 0.636
A0A316YHL0
Uncharacterized protein.
    
 0.635
A0A316YNN2
F-box domain-containing protein.
    
 0.635
A0A316YRH3
Uncharacterized protein.
    
 0.635
A0A316YWQ0
Uncharacterized protein.
    
 0.635
A0A316YXI8
RNI-like protein.
    
 0.635
Your Current Organism:
Acaromyces ingoldii
NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050
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