STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316YLS43,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. (277 aa)    
Predicted Functional Partners:
A0A316YKH6
Lumazine-binding protein.
 0.996
A0A316YTY4
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
 
 
 0.984
A0A316YK26
GTP_cyclohydro2 domain-containing protein.
 
   
 0.971
A0A316YWG7
Coronin; Belongs to the WD repeat coronin family.
  
 0.803
A0A316YYK6
PH domain-containing protein.
  
 0.803
A0A316YHK7
GTP cyclohydrolase I.
   
 
 0.765
A0A316YW61
Nucleoside diphosphate kinase.
  
 0.756
A0A316YLF9
Nucleoside diphosphate kinase.
  
 0.755
A0A316YYJ5
Uncharacterized protein.
 
      0.754
A0A316YPC6
Riboflavin kinase.
    
 0.743
Your Current Organism:
Acaromyces ingoldii
NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050
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