STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316YPV6Histone acetyltransferase type B catalytic subunit; Catalytic component of the histone acetylase B (HAT-B) complex. Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. Involved in DNA double-strand break repair; Belongs to the HAT1 family. (441 aa)    
Predicted Functional Partners:
A0A316YGV4
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.999
A0A316YJU4
Putative chromatin assembly factor 1 subunit C.
   
 0.999
A0A316YL80
SHNi-TPR domain-containing protein.
   
 
 0.985
A0A316YV61
ORC_WH_C domain-containing protein.
   
 
 0.940
A0A316YQL0
Uncharacterized protein.
    
 
 0.938
A0A316YE70
AAA domain-containing protein.
    
 
 0.929
A0A316YJR8
Uncharacterized protein.
   
 
 0.929
A0A316YC91
Histone chaperone ASF1.
   
 
 0.893
A0A316YQ52
Histone H3; Belongs to the histone H3 family.
    
 0.865
A0A316YT03
Histone H3-like centromeric protein cse-4.
    
 0.865
Your Current Organism:
Acaromyces ingoldii
NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.