STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316YQY3Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (352 aa)    
Predicted Functional Partners:
A0A316YPD5
Putative 60s ribosomal protein L7 subunit.
  
 
 0.909
A0A316YRF2
Putative RPL5-60S large subunit ribosomal protein L5.e.
  
 
 0.907
A0A316YLA2
Putative ribosomal protein L35.
  
 
 0.905
A0A316YSQ8
Ribosomal protein L24.
  
   0.887
A0A316YZ44
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.870
A0A316YJA3
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.866
A0A316YZ00
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
  
   0.857
A0A316YTP6
Putative RPL17A-ribosomal protein L17.e; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.831
A0A316YIA9
Ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family.
  
   0.805
A0A316YFI7
Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.796
Your Current Organism:
Acaromyces ingoldii
NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050
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