STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316YRS4TRAUB-domain-containing protein. (537 aa)    
Predicted Functional Partners:
A0A316YER4
Nop14-like protein.
   
 
 0.998
A0A316YUF1
Small-subunit processome.
   
 
 0.998
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.998
A0A316YKH0
KH domain-containing protein.
   
 
 0.997
A0A316YL38
Uncharacterized protein.
   
 
 0.997
A0A316YPM2
NUC189-domain-containing protein.
   
 
 0.997
A0A316YZ41
NUC153 domain-containing protein.
   
 
 0.997
A0A316YI01
BING4CT-domain-containing protein.
   
 
 0.996
A0A316YML3
WD40 repeat-like protein.
   
   0.996
A0A316YNJ5
WD40 repeat-like protein.
   
 
 0.996
Your Current Organism:
Acaromyces ingoldii
NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050
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