STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316YT22P-loop containing nucleoside triphosphate hydrolase protein. (1317 aa)    
Predicted Functional Partners:
A0A316Z2B6
RNA-binding domain-containing protein.
   
 0.867
A0A316YIV6
Pre-mRNA splicing factor.
    
 0.809
A0A316YWZ9
Small nuclear ribonucleoprotein Sm D2.
   
  0.807
A0A316Z1K9
Putative small nuclear ribonucleo protein F.
   
  0.795
A0A316YXU6
Putative PRP19-non-snRNP spliceosome component required for DNA repair.
   
 0.794
A0A316YP88
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.789
A0A316YKJ4
Uncharacterized protein.
    
 0.785
A0A316YUF1
Small-subunit processome.
   
 0.785
A0A316YRC5
RRM domain-containing protein.
   
  0.784
A0A316YS42
RNA-binding domain-containing protein.
   
  0.784
Your Current Organism:
Acaromyces ingoldii
NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.