STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316YUK9Putative ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family. (177 aa)    
Predicted Functional Partners:
A0A316YTF5
Putative NEDD8-ubiquitin-like protein.
   
 0.998
A0A316YLS1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.985
A0A316YSW1
RING/U-box.
    
 0.978
A0A316Y8R0
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
    
 0.976
A0A316YXV3
E2_bind domain-containing protein.
    
 0.975
A0A316YEW6
NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme.
    
 0.970
A0A316YW69
Putative SCF complex member Cullin 1; Belongs to the cullin family.
    
 0.912
A0A316YY17
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.910
A0A316YUL7
Ubiquitin-activating enzyme E1; Belongs to the ubiquitin-activating E1 family.
    
 0.906
A0A316YNY6
Chitin synthase; Plays a major role in cell wall biogenesis.
 
      0.888
Your Current Organism:
Acaromyces ingoldii
NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050
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