STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316YVY8Putative xylitol dehydrogenase. (394 aa)    
Predicted Functional Partners:
A0A316YGL5
Actin-like ATPase domain-containing protein.
  
 
 0.927
A0A316YL90
IGPS-domain-containing protein.
  
 0.699
A0A316YI26
PLP-dependent transferase.
 
 
 0.696
A0A316YRW2
PLP-dependent transferase.
 
 
 0.696
A0A316YUJ6
Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase.
 
 
 0.696
A0A316YVI0
PLP-dependent transferase.
  
 
 0.696
A0A316YGE5
Uncharacterized protein.
  
 
 0.676
A0A316YWD3
Putative DAK2-dihydroxyacetone kinase.
   
 0.667
A0A316YQ23
Phosphotransferase.
   
 
 0.657
A0A316YLK1
Phosphoglucomutase, first 3 domain-containing protein; Belongs to the phosphohexose mutase family.
   
 0.631
Your Current Organism:
Acaromyces ingoldii
NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050
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