STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316YX19L-amino acid oxidase LaoA. (664 aa)    
Predicted Functional Partners:
A0A316YX89
Tryptophan synthase.
     
 0.793
A0A316YGV4
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.701
A0A316YQD3
Histone H2B; Belongs to the histone H2B family.
    
  0.693
A0A316YJU4
Putative chromatin assembly factor 1 subunit C.
    
 0.671
A0A316YK66
JmjC-domain-containing protein.
   
 0.667
A0A316YCA0
DUF2236 domain-containing protein.
    
 0.655
A0A316YQ52
Histone H3; Belongs to the histone H3 family.
    
 0.655
A0A316YT03
Histone H3-like centromeric protein cse-4.
    
 0.655
A0A316YT14
DUF2236 domain-containing protein.
    
 0.655
A0A316YWW8
Histone H3; Belongs to the histone H3 family.
    
 0.655
Your Current Organism:
Acaromyces ingoldii
NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050
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