STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316YXG9Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family. (1882 aa)    
Predicted Functional Partners:
A0A316YGT2
Putative SEC24-COPII coated vesicle component.
   
 0.997
A0A316YRA3
Putative SEC13-protein transport protein; Belongs to the WD repeat SEC13 family.
    
 0.994
A0A316YS89
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.979
A0A316YFS3
Beta-sandwich domain of Sec23/24.
   
 0.975
A0A316YXT6
Putative GTP-binding protein SAR1; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.899
A0A316YPJ4
Uncharacterized protein.
   
 0.879
A0A316YSS0
GFA domain-containing protein.
   
 0.879
A0A316YUR6
WD_REPEATS_REGION domain-containing protein.
   
 0.879
A0A316YDB0
Putative SEC22-synaptobrevin; Belongs to the synaptobrevin family.
   
 
 0.809
A0A316YDD7
t-SNARE.
   
 
 0.785
Your Current Organism:
Acaromyces ingoldii
NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050
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