STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316YXU3S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (630 aa)    
Predicted Functional Partners:
A0A316YQ94
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
    
 0.867
A0A316YGV4
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.866
A0A316YZU9
Fibrillarin.
   
 
 0.831
A0A316YY90
DEAD-domain-containing protein; Belongs to the DEAD box helicase family.
   
  0.802
A0A316YUS4
RNA-binding domain-containing protein.
   
 
 0.796
A0A316YKF6
Bystin-domain-containing protein.
   
  0.787
A0A316YMA8
DUF663-domain-containing protein.
   
  0.787
A0A316YLN0
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.786
A0A316YQT9
RNA helicase; Belongs to the DEAD box helicase family.
   
  0.760
A0A316YS88
NUC173-domain-containing protein.
   
   0.752
Your Current Organism:
Acaromyces ingoldii
NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050
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