STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316YZU9Fibrillarin. (342 aa)    
Predicted Functional Partners:
A0A316YH42
Putative SIK1-involved in pre-rRNA processing.
   
 0.999
A0A316YRP2
WD40 repeat-like protein.
   
 0.999
A0A316YSK3
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.999
A0A316Z259
Nop domain-containing protein.
   
 0.999
A0A316YQ88
U3 small nucleolar RNA-associated protein 22.
   
 0.998
A0A316YIX9
Putative rRNA pseudouridine synthase.
   
 
 0.997
A0A316YU37
ANAPC4_WD40 domain-containing protein.
   
 0.997
A0A316YY57
Putative 40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
 
 
 0.997
A0A316YZV3
WD40 repeat-like protein.
   
 0.997
A0A316YKF6
Bystin-domain-containing protein.
   
 
 0.996
Your Current Organism:
Acaromyces ingoldii
NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.