STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A316Z2C4Putative RRP45-exosome complex exonuclease. (335 aa)    
Predicted Functional Partners:
A0A316YCX4
Putative exosome complex exonuclease rrp41.
   
 0.999
A0A316YK20
Ribosomal protein S5 domain 2-like protein.
  
0.999
A0A316YM36
Uncharacterized protein.
   
 0.999
A0A316YPR9
EXOSC1 domain-containing protein.
   
 0.999
A0A316YPV7
Uncharacterized protein.
   
 0.999
A0A316YTP9
RNase_PH domain-containing protein.
   
 0.999
A0A316YW68
RNase_PH domain-containing protein.
   
 0.999
A0A316YX73
RNase_PH domain-containing protein.
   
 0.999
A0A316YWD4
Antiviral helicase.
   
 0.996
A0A316YXZ2
RNB-domain-containing protein.
   
 0.996
Your Current Organism:
Acaromyces ingoldii
NCBI taxonomy Id: 215250
Other names: A. ingoldii, AS001, CBS 110050
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