STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rusc2Iporin isoform X1. (1679 aa)    
Predicted Functional Partners:
mvd
Diphosphomevalonate decarboxylase isoform X2.
  
 0.768
fdft1
Farnesyl-diphosphate farnesyltransferase.
  
 0.735
idi1
Isopentenyl-diphosphate Delta-isomerase 1.
  
 
 0.688
lss
Lanosterol synthase.
  
 
 0.679
coq2
4-hydroxybenzoate polyprenyltransferase, mitochondrial.
  
 
 0.638
ggps1
Geranylgeranyl diphosphate synthase, type III.
    
 0.616
ubiad1
UbiA prenyltransferase domain-containing protein 1.
    
 0.613
ndufaf6
NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1.
  
 0.612
wdr97
WD repeat-containing protein 97 isoform X1.
  
 0.612
LOC104923366
Ras-related protein Rab-35-like.
    
 
 0.600
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.