STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104929501BTB/POZ domain-containing protein 3/6. (551 aa)    
Predicted Functional Partners:
GAN
Kelch-like protein 16 (gigaxonin).
     
 0.549
CUL3
Cullin 3.
    
 0.535
LOC104924156
Cullin-3 isoform X1.
    
 0.535
rbx1
E3 ubiquitin-protein ligase RBX1.
    
 0.534
bbs9
Bardet-Biedl syndrome 9 protein.
    
 0.526
nae1
Amyloid beta precursor protein binding protein 1.
     
 0.510
cand1
Cullin associated and neddylation dissociated 1.
     
 0.494
ENSLCRP00005003755
annotation not available
     
 0.494
LOC104931982
Cullin-associated NEDD8-dissociated protein 1.
     
 0.494
bbs7
Bardet-Biedl syndrome 7 protein.
    
 0.485
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.