STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankrd46Ankyrin repeat domain-containing protein 46. (228 aa)    
Predicted Functional Partners:
ubxn7
UBX domain-containing protein 7.
    
 0.947
cul2
Cullin 2.
    
 0.831
eloc
Elongin-C.
    
 0.700
rbx1
E3 ubiquitin-protein ligase RBX1.
    
 0.578
rnf7
RING-box protein 2.
    
 0.578
mgrn1
E3 ubiquitin-protein ligase MGRN1 isoform X1.
    
 
 0.561
ENSLCRP00005038282
annotation not available
    
 0.545
LOC104927186
Elongin-B.
    
 0.539
ELOB
Elongin-B-like.
    
 0.539
cars2
Probable cysteine--tRNA ligase, mitochondrial isoform X1.
    
 
 0.532
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.