STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104919141Proteasome subunit beta type-11. (318 aa)    
Predicted Functional Partners:
ubxn7
UBX domain-containing protein 7.
    
  0.973
psmb4
Proteasome subunit beta type-4.
   
 0.968
psmb2
Proteasome subunit beta type-2.
   
 0.967
psma3
Proteasome subunit alpha type-3.
   
 0.965
psmb3
Proteasome subunit beta type-3.
   
 0.961
psma5
Proteasome subunit alpha type-5.
   
 0.959
PSMA2
Proteasome subunit alpha type-2.
   
 0.953
psma1
Proteasome subunit alpha type-1.
   
 0.953
psmb1
Proteasome subunit beta type-1.
   
 0.948
LOC104933385
Proteasome subunit beta type-6-A like protein.
  
0.945
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.