STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113745064Dynactin subunit 6-like. (180 aa)    
Predicted Functional Partners:
actr10
Actin-related protein 10.
   
 0.953
dctn5
Dynactin subunit 5.
   
 0.946
dctn4
Dynactin subunit 4 isoform X1.
    
 0.945
dctn2
Dynactin subunit 2.
    
 0.933
dctn3
Dynactin subunit 3.
    
 0.920
LOC104936322
Beta-centractin.
    
 0.916
capzb
Capping actin protein of muscle Z-line subunit beta.
    
 0.902
LOC104925200
Dynactin subunit 1 isoform X1.
    
 0.848
LOC104932475
Dynactin subunit 1 isoform X1.
    
 0.848
fam193a
Protein FAM193A isoform X1.
    
 0.787
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.