STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104933217Beta-1,4-galactosyltransferase 3. (432 aa)    
Predicted Functional Partners:
fut8
Glycoprotein 6-alpha-L-fucosyltransferase.
     
 0.922
ENSLCRP00005041340
Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A.
   
 
 0.917
pomgnt1
Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1.
   
 0.916
st6gal2
Beta-galactoside alpha-2,6-sialyltransferase (sialyltransferase 2).
     
 0.914
LOC104934011
Beta-galactoside alpha-2,6-sialyltransferase (sialyltransferase 2).
     
 0.914
LOC104926545
Mannosyl alpha-1,6-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B.
     
 0.914
MGAT5B
Mannosyl alpha-1,6-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B.
     
 0.914
ENSLCRP00005038427
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3.
   
 
 0.914
B3GNT3
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3.
   
 
 0.914
LOC104921796
Beta-galactoside alpha-2,6-sialyltransferase (sialyltransferase 1).
     
 0.914
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.