STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCRP00005003379annotation not available (136 aa)    
Predicted Functional Partners:
nudt12
Peroxisomal NADH pyrophosphatase NUDT12.
    
 
 0.643
CLPB
ATP-dependent Clp protease ATP-binding subunit ClpB.
      
 0.507
tsfm
Elongation factor Ts, mitochondrial.
      
 0.497
tpp2
Tripeptidyl-peptidase 2 isoform X1.
   
 
 0.449
nudt13
Nucleoside diphosphate-linked moiety X motif 13 isoform X2.
    
   0.448
edf1
Endothelial differentiation-related factor 1 isoform X1.
      
 0.412
spata4
Spermatogenesis-associated protein 4 isoform X1.
      
 0.407
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.