STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104925927Serine/threonine-protein kinase 17A. (372 aa)    
Predicted Functional Partners:
ENSLCRP00005002986
annotation not available
 
  
   0.872
ENSLCRP00005029624
annotation not available
 
  
   0.799
Ttn
Titin.
 
  
   0.771
ENSLCRP00005029551
annotation not available
 
  
   0.740
ENSLCRP00005003000
annotation not available
 
  
   0.705
ARHGEF25
Rho guanine nucleotide exchange factor 25 isoform X1.
 
      0.700
LOC104931955
Rho guanine nucleotide exchange factor 25 isoform X5.
 
      0.691
nme5
Nucleoside diphosphate kinase homolog 5.
   
 
 0.444
LOC104939945
Calcium/calmodulin-dependent serine protein kinase.
   
0.408
CASK
Calcium/calmodulin-dependent serine protein kinase.
   
0.408
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.