STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104939401Pyruvate dehydrogenase [acetyl-transferring]-phosphatase 1, mitochondrial. (443 aa)    
Predicted Functional Partners:
pdhb
Pyruvate dehydrogenase E1 beta subunit.
   
 0.699
pdpr
Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial.
   
 0.641
pdhx
Pyruvate dehydrogenase complex component X.
  
 0.633
LOC104924583
Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial.
    
 0.625
LOC104934078
Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial isoform X1.
    
 0.625
dld
Dihydrolipoyl dehydrogenase, mitochondrial.
   
 0.622
dlat
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
  
 0.600
LOC104924584
Serine/arginine repetitive matrix protein 1-like.
    
 0.586
sardh
Sarcosine dehydrogenase, mitochondrial isoform X1.
   
 0.556
dmgdh
Dimethylglycine dehydrogenase, mitochondrial.
   
 0.535
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.