STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACVR1BActivin receptor type-1B. (499 aa)    
Predicted Functional Partners:
LOC104940378
Inhibin beta B chain isoform X1.
   
 0.960
INHBB
Inhibin beta B chain.
   
 0.958
bambi
BMP and activin membrane-bound inhibitor homolog.
    
 0.954
inhba
Inhibin beta A chain.
   
 0.952
LOC104934797
Inhibin beta A chain.
   
 0.952
mstn
Growth differentiation factor 8.
    
 0.950
smad3
Mothers against decapentaplegic homolog 3.
   
 0.948
LOC104924990
Mothers against decapentaplegic homolog 2 isoform X1.
   
 0.948
LOC104937251
Growth/differentiation factor 11 isoform X1.
    
 0.946
LOC104920316
Nodal homolog.
    
 0.945
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.