Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC104920145 | itsn2 | ENSLCRP00005050821 | ENSLCRP00005024733 | Intersectin-2. | Intersectin 2. | 0.960 |
LOC104920145 | macf1 | ENSLCRP00005050821 | ENSLCRP00005004221 | Intersectin-2. | Microtubule actin crosslinking factor 1. | 0.524 |
LOC104920145 | sptan1 | ENSLCRP00005050821 | ENSLCRP00005063895 | Intersectin-2. | Spectrin alpha chain, non-erythrocytic 1 isoform X3. | 0.943 |
LOC104922057 | LOC104928105 | ENSLCRP00005028633 | ENSLCRP00005055793 | Catenin beta 1. | Catenin beta 1. | 0.900 |
LOC104922057 | dsc2 | ENSLCRP00005028633 | ENSLCRP00005044601 | Catenin beta 1. | Desmocollin 2. | 0.721 |
LOC104922057 | macf1 | ENSLCRP00005028633 | ENSLCRP00005004221 | Catenin beta 1. | Microtubule actin crosslinking factor 1. | 0.536 |
LOC104922057 | pkp2 | ENSLCRP00005028633 | ENSLCRP00005058624 | Catenin beta 1. | Plakophilin 2. | 0.494 |
LOC104922277 | LOC104928105 | ENSLCRP00005007047 | ENSLCRP00005055793 | Junction plakoglobin. | Catenin beta 1. | 0.917 |
LOC104922277 | dsc2 | ENSLCRP00005007047 | ENSLCRP00005044601 | Junction plakoglobin. | Desmocollin 2. | 0.832 |
LOC104922277 | macf1 | ENSLCRP00005007047 | ENSLCRP00005004221 | Junction plakoglobin. | Microtubule actin crosslinking factor 1. | 0.607 |
LOC104922277 | pkp2 | ENSLCRP00005007047 | ENSLCRP00005058624 | Junction plakoglobin. | Plakophilin 2. | 0.667 |
LOC104928105 | LOC104922057 | ENSLCRP00005055793 | ENSLCRP00005028633 | Catenin beta 1. | Catenin beta 1. | 0.900 |
LOC104928105 | LOC104922277 | ENSLCRP00005055793 | ENSLCRP00005007047 | Catenin beta 1. | Junction plakoglobin. | 0.917 |
LOC104928105 | LOC104933870 | ENSLCRP00005055793 | ENSLCRP00005046203 | Catenin beta 1. | Junction plakoglobin. | 0.917 |
LOC104928105 | dsc2 | ENSLCRP00005055793 | ENSLCRP00005044601 | Catenin beta 1. | Desmocollin 2. | 0.721 |
LOC104928105 | macf1 | ENSLCRP00005055793 | ENSLCRP00005004221 | Catenin beta 1. | Microtubule actin crosslinking factor 1. | 0.536 |
LOC104928105 | pkp2 | ENSLCRP00005055793 | ENSLCRP00005058624 | Catenin beta 1. | Plakophilin 2. | 0.495 |
LOC104933870 | LOC104928105 | ENSLCRP00005046203 | ENSLCRP00005055793 | Junction plakoglobin. | Catenin beta 1. | 0.917 |
LOC104933870 | dsc2 | ENSLCRP00005046203 | ENSLCRP00005044601 | Junction plakoglobin. | Desmocollin 2. | 0.832 |
LOC104933870 | macf1 | ENSLCRP00005046203 | ENSLCRP00005004221 | Junction plakoglobin. | Microtubule actin crosslinking factor 1. | 0.607 |
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